Molecular dynamic simulations of the human calcitonin receptor extracellular domain with RAMP1


Creators: Poyner, David and Simms, John
Divisions: College of Health and Life Sciences > School of Biosciences
Funders: Maurice Wilkins Centre for Molecular Biodiscovery, Maurice and Phyllis Paykel Trust, University of Auckland doctoral scholarship, National Heart Foundation of New Zealand, National Institute of Health, Wellcome Trust, National Health and Medical Research Council of Australia
Grant number: R01GM104251, 091496, 1061044, 1055134
Data Publisher: Aston University
Date Made Available: 4 March 2016
Collection period:
Data Collection and Processing Methods: These files are the first 10 eigenvectors arising after principle component analysis. An homology model of the extracellular domain of the receptor in complex with the extracellular domain of RAMP1 was generated and the minimised protein was placed centrally in a charge neutral cubic box (x=10nm) consisting of TIP3 water molecules, 150 mM NaCl and simulated for 1µs. The files consist of 99 snapshots. They may be viewed using VMD, available freely from the University of Illinois.
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